【求助】求靶基因预测软件

:):):)
我最近在做一个ncRNA 的项目，希望大家能给我提供几款靶基因预测的软件
我自己找过很多但都下不下来。。。
最好能顺便提供教程

呵呵，ncRNA可是一个大范围啊？你需要什么样的靶基因预测的软件？你做的是什么ncRNA，能否说的明确一点？

TargetScan miRanda DIANA2MicroT PicTar这之类的软件
我在网上找的都不能用
十分希望您能帮帮忙……

直接在网上预测啊，好像没有下载的软件可用吧？

终于找到软件了，也知道怎么用了，但是结果看不懂……
有米有人可以帮帮忙啊

Query Filename:    mir.fa
Reference Filename:  UTR.fa
Gap Open Penalty:  -8.000000
Gap Extend:    -2.000000
Score Threshold    50.000000
Energy Threshold  -20.000000 kcal/mol
Scaling Parameter:  2.000000
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Read Sequence:hsa-miR-21 MIMAT0000076(22 nt)
Read Sequence:2_A2M (112 nt)
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Performing Scan: hsa-miR-21 vs 2_A2M
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:10_NAT2 (372 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 10_NAT2
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:34_ACADM (671 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 34_ACADM
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:35_ACADS (522 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 35_ACADS
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Forward:  Score: 85.000000 Q:1 to 23 R:197 to 221 Align Len (25) (72.00%) (76.00%)

Query: 3' AGUUGUAGUC-AGACU--AUUCGAU 5'
|||:| |||| |||| | |||||
Ref: 5' UCAGC-UCAGAGCUGAGCUUGGCUG 3'

Energy: -21.100000 kCal/Mol

Scores for this hit:
>hsa-miR-21  35_ACADS  85.00  -21.10  0.00  1 23  197 221  25  72.00%  76.00%

Score for this Scan:
Seq1,Seq2,Tot Score,Tot Energy,Max Score,Max Energy,Strand,Len1,Len2,Positions
>>hsa-miR-21  35_ACADS  85.00  -21.10  85.00  -21.10  4  22  522   196
Complete

Read Sequence:37_ACADVL (108 nt)
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Performing Scan: hsa-miR-21 vs 37_ACADVL
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:38_ACAT1 (138 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 38_ACAT1
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:94_ACVRL1 (1774 nt)
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Performing Scan: hsa-miR-21 vs 94_ACVRL1
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:5663_PSEN1 (1024 nt)
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Performing Scan: hsa-miR-21 vs 5663_PSEN1
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:100_ADA (226 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 100_ADA
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:6442_SGCA (209 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 6442_SGCA
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:154_ADRB2 (571 nt)
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Performing Scan: hsa-miR-21 vs 154_ADRB2
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Forward:  Score: 87.000000 Q:2 to 23 R:508 to 528 Align Len (21) (80.95%) (80.95%)

Query: 3' AGUUGUAGUCAGACUAUUCGAU 5'
||||||||| ||| | ||||
Ref: 5' ACAACAUCAG-UUGUUUUGCUG 3'

Energy: -21.889999 kCal/Mol

Scores for this hit:
>hsa-miR-21  154_ADRB2  87.00  -21.89  0.00  2 23  508 528  21  80.95%  80.95%

Score for this Scan:
Seq1,Seq2,Tot Score,Tot Energy,Max Score,Max Energy,Strand,Len1,Len2,Positions
>>hsa-miR-21  154_ADRB2  87.00  -21.89  87.00  -21.89  11  22  571   507
Complete

Read Sequence:155_ADRB3 (1198 nt)
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Performing Scan: hsa-miR-21 vs 155_ADRB3
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:158_ADSL (124 nt)
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Performing Scan: hsa-miR-21 vs 158_ADSL
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:175_AGA (861 nt)
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Performing Scan: hsa-miR-21 vs 175_AGA
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:178_AGL (979 nt)
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Performing Scan: hsa-miR-21 vs 178_AGL
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:183_AGT (406 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 183_AGT
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:189_AGXT (258 nt)
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Performing Scan: hsa-miR-21 vs 189_AGXT
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:210_ALAD (329 nt)
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Performing Scan: hsa-miR-21 vs 210_ALAD
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:212_ALAS2 (123 nt)
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Performing Scan: hsa-miR-21 vs 212_ALAS2
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:215_ABCD1 (982 nt)
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Performing Scan: hsa-miR-21 vs 215_ABCD1
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:226_ALDOA (184 nt)
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Performing Scan: hsa-miR-21 vs 226_ALDOA
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:229_ALDOB (367 nt)
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Performing Scan: hsa-miR-21 vs 229_ALDOB
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:324_APC (1488 nt)
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Performing Scan: hsa-miR-21 vs 324_APC
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:335_APOA1 (62 nt)
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Performing Scan: hsa-miR-21 vs 335_APOA1
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:345_APOC3 (166 nt)
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Performing Scan: hsa-miR-21 vs 345_APOC3
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:348_APOE (111 nt)
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Performing Scan: hsa-miR-21 vs 348_APOE
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:350_APOH (100 nt)
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Performing Scan: hsa-miR-21 vs 350_APOH
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:355_FAS (347 nt)
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Performing Scan: hsa-miR-21 vs 355_FAS
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:367_AR (419 nt)
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Performing Scan: hsa-miR-21 vs 367_AR
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:383_ARG1 (387 nt)
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Performing Scan: hsa-miR-21 vs 383_ARG1
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:411_ARSB (2396 nt)
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Performing Scan: hsa-miR-21 vs 411_ARSB
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:435_ASL (135 nt)
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Performing Scan: hsa-miR-21 vs 435_ASL
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:443_ASPA (300 nt)
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Performing Scan: hsa-miR-21 vs 443_ASPA
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:445_ASS1 (258 nt)
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Performing Scan: hsa-miR-21 vs 445_ASS1
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:472_ATM (1214 nt)
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Performing Scan: hsa-miR-21 vs 472_ATM
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:538_ATP7A (2837 nt)
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Performing Scan: hsa-miR-21 vs 538_ATP7A
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:540_ATP7B (1840 nt)
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Performing Scan: hsa-miR-21 vs 540_ATP7B
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Forward:  Score: 94.000000 Q:2 to 23 R:1363 to 1384 Align Len (22) (77.27%) (81.82%)

Query: 3' AGUUGUAGUCAGA-CUAUUCGAU 5'
|:||| || || |||||||||
Ref: 5' GCGACAGGAG-CUGGAUGAGUUG 3'

Energy: -20.200001 kCal/Mol

Scores for this hit:
>hsa-miR-21  540_ATP7B  94.00  -20.20  0.00  2 23  1363 1384  22  77.27%  81.82%

Score for this Scan:
Seq1,Seq2,Tot Score,Tot Energy,Max Score,Max Energy,Strand,Len1,Len2,Positions
>>hsa-miR-21  540_ATP7B  94.00  -20.20  94.00  -20.20  37  22  1840   1362
Complete

Read Sequence:554_AVPR2 (390 nt)
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Performing Scan: hsa-miR-21 vs 554_AVPR2
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:590_BCHE (450 nt)
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Performing Scan: hsa-miR-21 vs 590_BCHE
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:641_BLM (155 nt)
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Performing Scan: hsa-miR-21 vs 641_BLM
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:675_BRCA2 (495 nt)
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Performing Scan: hsa-miR-21 vs 675_BRCA2
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:686_BTD (276 nt)
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Performing Scan: hsa-miR-21 vs 686_BTD
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:695_BTK (399 nt)
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Performing Scan: hsa-miR-21 vs 695_BTK
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:710_SERPING1 (203 nt)
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Performing Scan: hsa-miR-21 vs 710_SERPING1
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:717_C2 (515 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 717_C2
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:718_C3 (38 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 718_C3
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:729_C6 (553 nt)
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Performing Scan: hsa-miR-21 vs 729_C6
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:732_C8B (165 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 732_C8B
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:760_CA2 (679 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 760_CA2
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:773_CACNA1A (537 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 773_CACNA1A
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:779_CACNA1S (321 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 779_CACNA1S
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:875_CBS (226 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 875_CBS
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:917_CD3G (402 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 917_CD3G
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:959_CD40LG (895 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 959_CD40LG
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:1019_CDK4 (284 nt)
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Performing Scan: hsa-miR-21 vs 1019_CDK4
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Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:1028_CDKN1C (683 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 1028_CDKN1C
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:1071_CETP (139 nt)
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Performing Scan: hsa-miR-21 vs 1071_CETP
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:1134_CHRNA1 (493 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 1134_CHRNA1
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:1145_CHRNE (772 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 1145_CHRNE
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:1130_LYST (1605 nt)
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Performing Scan: hsa-miR-21 vs 1130_LYST
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:1161_ERCC8 (629 nt)
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing Scan: hsa-miR-21 vs 1161_ERCC8
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Score for this Scan:
No Hits Found above Threshold
Complete

Read Sequence:1180_CLCN1 (39 nt)
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Performing Scan: hsa-miR-21 vs 1180_CLCN1
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Score for this Scan:
No Hits Found above Threshold
Complete

介绍一款软件：

http://www.dxy.cn/bbs/topic/27895427
利用此软件可以方便的进行靶基因预测、交集和并集