非常全面的各个蛋白数据库链接

相关专题

 

随着生物信息学、蛋白组学的发展，研究蛋白结构域，蛋白序列等研究越来越成为必备技能，因此，蛋白数据库的了解和使用越来越显得重要。对此，北京大学 医学部就列出了各个蛋白相关数据库的链接，方便科研人员研究和使用。

通用数据库

MIPS - Protein sequences and complete genomic sequences

PDB - Protein Data Bank

PIR-international - Protein sequence database co-developed by NBRF, MiPS and JIPID

SWISS-PROT - SWISS-PROT annotated protein sequence database

蛋白多肽相关数据库

BioImage - European biological image database (contains microelectroscopic imaging data on macromolecules)

BioMagResBank - Repository for data on proteins, peptides, and nucleic acids from NMR spectroscopy

BLOCKS - BLOCKS database

DOMO - Protein domain database (Automatically generated)

Pfam - Protein families database (HMM derived)

2D与3D结构数据库

BMM Domain Server - Biomolecular Modelling Laboratory (ICRF) protein domain server

CATH - Univ College London BSM structural classification of proteins

CCDC - Cambridge Crystallographic Data Center (Cambridge Stuctural Database (CSD))

NHGRI Homeodomain Resource - A prototype database for a large protein family

SCOP - Structural classification of proteins

PROTOMAP - An automatic hierarchical classification of SWISS-PROT proteins

SWISS-3DIMAGE - 3D images of proteins and other biological macromolecules

SWISS-MODEL Repository - Automatically generated protein models database

TOPS - Topology cartoons diagrams

The Molecules of Life

生物大分子 数据库

ESTHER - Esterases, alpha/beta hydrolase enzyme and relatives

The Ion Channel Network (ICN)

NHGRI/NCBI Histone Sequence Database

LIGAND

Mol_R_Us - Molecule R Us, browser for PDB

MPW - Metabolic pathways

PROLYSIS － A protease and protease inhibitor Web server

酶－代谢数据库

a protease and protease inhibitor Web server

GenLink Multimedia Telomere Resource

MEROPS - The MEROPS database provides a wealth of information on proteases.

REBASE - restriction enzymes and methylases

Telomere & Telomerase Reseach Information

受体与信息传递数据库

G-Protein Coupled Receptor Database

Olfactory Receptor DataBase

ReLiBase - Receptor/ligand complexes database

SENTRA : A Database of Sensory Signal Transduction Proteins

SMART - Protein signalling and extracellular domain patterns

蛋白种类关系数据库

DIP - Database of Interacting Proteins

遗传变异数据库

Andogen Receptor Mutations Database

Ataxia-Telangiectasia Mutation Database - Virginia Mason Research Center

ATbase - A registry of patients with ataxia-telangiectasia

ALPSbase - Autoimmune Lymphoproliferative Syndrome Database,a database of mutations causing human ALPS

Fanconi Anemia Mutation Database

IL2RGbase : Database of Mutations Causing Human X-Linked SCID (XSCID/X-SCID)

Immunodeficiency Databases (IDbases)

Keio mutation database for human disease gene mutations

Mutation Databases - University of Tampere

OMIM - Online Mendelian Inheritance in Man

PMD - Protein Mutation database

p53 Database

Tetrahydrobiopterin - BH4

其它

DExH/PROTEIN DATABASE

PRINTS - Protein Motif fingerprint database

PRESAGE - Collaborative Database of experimental data on proteins

ProDom - Protein domain database (Automatically generated)

PROSITE - PROSITE dictionary of protein sites and patterns

本文列举了蛋白相关数据库：除了大家比较熟悉的通用数据库如PDB、PIR，SWISS-PROT ，还有其他的如生物大分子数据库、受体与信息传递数据库，希望大家能受用。