low frequency table
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low frequency table
Codon usage for C. elegans lowly biased (lowly expressed, by inference) genes. (Stenico, M., Lloyd, A. T., and Sharp, P. M. (1994). Nucleic Acids Research 22: 2437-2246
AmAcid | Codon | Number | /1000 | Fraction |
---|---|---|---|---|
Gly | GGG | 32 | 4.34 | 0.09 |
Gly | GGA | 207 | 28.05 | 0.57 |
Gly | GGT | 96 | 13.01 | 0.26 |
Gly | GGC | 28 | 3.79 | 0.08 |
Glu | GAG | 140 | 18.97 | 0.26 |
Glu | GAA | 393 | 53.26 | 0.74 |
Asp | GAT | 341 | 46.21 | 0.76 |
Asp | GAC | 106 | 14.37 | 0.24 |
Val | GTG | 72 | 9.76 | 0.16 |
Val | GTA | 101 | 13.69 | 0.23 |
Val | GTT | 201 | 27.24 | 0.46 |
Val | GTC | 67 | 9.08 | 0.15 |
Ala | GCG | 58 | 7.86 | 0.15 |
Ala | GCA | 179 | 24.26 | 0.46 |
Ala | GCT | 106 | 14.37 | 0.27 |
Ala | GCC | 48 | 6.5 | 0.12 |
Arg | AGG | 31 | 4.2 | 0.07 |
Arg | AGA | 132 | 17.89 | 0.29 |
Ser | AGT | 111 | 15.04 | 0.2 |
Ser | AGC | 46 | 6.23 | 0.08 |
Lys | AAG | 127 | 17.21 | 0.3 |
Lys | AAA | 297 | 40.25 | 0.7 |
Asn | AAT | 258 | 34.96 | 0.73 |
Asn | AAC | 97 | 13.15 | 0.27 |
Met | ATG | 237 | 32.12 | 1 |
Ile | ATA | 79 | 10.71 | 0.18 |
Ile | ATT | 265 | 35.91 | 0.6 |
Ile | ATC | 99 | 13.42 | 0.22 |
Thr | ACG | 86 | 11.65 | 0.21 |
Thr | ACA | 171 | 23.17 | 0.42 |
Thr | ACT | 111 | 15.04 | 0.28 |
Thr | ACC | 35 | 4.74 | 0.09 |
Trp | TGG | 86 | 11.65 | 1 |
End | TGA | 6 | 0.81 | 0.4 |
Cys | TGT | 104 | 14.09 | 0.64 |
Cys | TGC | 58 | 7.86 | 0.36 |
End | TAG | 2 | 0.27 | 0.13 |
End | TAA | 7 | 0.95 | 0.47 |
Tyr | TAT | 157 | 21.28 | 0.69 |
Tyr | TAC | 70 | 9.49 | 0.31 |
Leu | TTG | 139 | 18.84 | 0.22 |
Leu | TTA | 111 | 15.04 | 0.17 |
Phe | TTT | 172 | 23.31 | 0.53 |
Phe | TTC | 153 | 20.73 | 0.47 |
Ser | TCG | 61 | 8.27 | 0.11 |
Ser | TCA | 178 | 24.12 | 0.31 |
Ser | TCT | 118 | 15.99 | 0.21 |
Ser | TCC | 52 | 7.05 | 0.09 |
Arg | CGG | 39 | 5.29 | 0.09 |
Arg | CGA | 169 | 22.9 | 0.37 |
Arg | CGT | 77 | 10.44 | 0.17 |
Arg | CGC | 9 | 1.22 | 0.02 |
Gln | CAG | 87 | 11.79 | 0.25 |
Gln | CAA | 256 | 34.69 | 0.75 |
His | CAT | 121 | 16.4 | 0.65 |
His | CAC | 65 | 8.81 | 0.35 |
Leu | CTG | 85 | 11.52 | 0.13 |
Leu | CTA | 73 | 9.89 | 0.11 |
Leu | CTT | 156 | 21.14 | 0.24 |
Leu | CTC | 77 | 10.44 | 0.12 |
Pro | CCG | 58 | 7.86 | 0.17 |
Pro | CCA | 165 | 22.36 | 0.49 |
Pro | CCT | 81 | 10.98 | 0.24 |
Pro | CCC | 30 | 4.07 | 0.09 |